PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN10703.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 210aa    MW: 23134.4 Da    PI: 9.9386
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN10703.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.4e-1059103554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  KHN10703.1  59 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 103
                 99***********************55......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-1552113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.1254103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-1556113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-759103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.5E-1160109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MKPDEASASG KRFRDDVVDN RAKHVFHGQP MPTTMPAAPH PPAIRPRVRA RRGQATDPHS  60
IAERLRRERI AERIRALQEL VPSVNKTDRA AMLDEIVDYV KFLRLQVKVL SMSRLGGAGA  120
VAPLVTDIPL SSVEEEGGEG ARNRPAWDKW SNDGTERQVA KLMEENVGAA MQFLQSKALC  180
IMPISLASAI YQSQPPDTSS IVKHETSPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16368RLRRER
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003521266.11e-153PREDICTED: transcription factor UNE12
SwissprotO227681e-110UNE12_ARATH; Transcription factor UNE12
TrEMBLA0A0B2PSH61e-153A0A0B2PSH6_GLYSO; Transcription factor UNE12
TrEMBLI1JNY91e-153I1JNY9_SOYBN; Uncharacterized protein
STRINGGLYMA03G31510.11e-153(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54493253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.34e-88bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]